IL_8FC3_146

3D structure

PDB id

8FC3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

UGAAAGACC*GGGGGAG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FC3|1|1a|U|605
8FC3|1|1a|G|606
8FC3|1|1a|A|607
8FC3|1|1a|A|608
8FC3|1|1a|A|609
8FC3|1|1a|G|610
8FC3|1|1a|A|611
8FC3|1|1a|C|612
8FC3|1|1a|C|613
*
8FC3|1|1a|G|627
8FC3|1|1a|G|628
8FC3|1|1a|G|629
8FC3|1|1a|G|630
8FC3|1|1a|G|631
8FC3|1|1a|A|632
8FC3|1|1a|G|633

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains

Chain 1d

30S ribosomal protein S4

Chain 1h

30S ribosomal protein S8

Chain 1p

30S ribosomal protein S16

Chain 1q

30S ribosomal protein S17