IL_8FC3_223

3D structure

PDB id

8FC3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

AGGUGGCU*AGCCAUCCU

Length

17 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FC3|1|2A|A|1057
8FC3|1|2A|G|1058
8FC3|1|2A|G|1059
8FC3|1|2A|U|1060
8FC3|1|2A|G|1062
8FC3|1|2A|G|1063
8FC3|1|2A|C|1064
8FC3|1|2A|U|1065
*
8FC3|1|2A|A|1073
8FC3|1|2A|G|1074
8FC3|1|2A|C|1075
8FC3|1|2A|C|1076
8FC3|1|2A|A|1077
8FC3|1|2A|U|1078
8FC3|1|2A|C|1079
8FC3|1|2A|C|1080
8FC3|1|2A|U|1081

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2Q

50S ribosomal protein L16

Chain 2Z

50S ribosomal protein L25