3D structure

PDB id
8FC3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.60A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.6 Å

Loop

Sequence
CUGUGAACCC*GGGGGAG
Length
17 nucleotides
Bulged bases
8FC3|1|2A|U|2132, 8FC3|1|2A|A|2135
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8FC3|1|2A|C|2129
8FC3|1|2A|U|2130
8FC3|1|2A|G|2131
8FC3|1|2A|U|2132
8FC3|1|2A|G|2133
8FC3|1|2A|A|2134
8FC3|1|2A|A|2135
8FC3|1|2A|C|2136
8FC3|1|2A|C|2137
8FC3|1|2A|C|2138
*
8FC3|1|2A|G|2153
8FC3|1|2A|G|2154
8FC3|1|2A|G|2155
8FC3|1|2A|G|2156
8FC3|1|2A|G|2157
8FC3|1|2A|A|2158
8FC3|1|2A|G|2159

Current chains

Chain 2A
23S Ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1742 s