IL_8FC4_371

3D structure

PDB id

8FC4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.45A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.45 Å

Loop

Sequence

CGAAGACAGCC*GGUCGAG

Length

18 nucleotides

Bulged bases

8FC4|1|2A|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FC4|1|2A|C|1043
8FC4|1|2A|G|1044
8FC4|1|2A|A|1045
8FC4|1|2A|A|1046
8FC4|1|2A|G|1047
8FC4|1|2A|A|1048
8FC4|1|2A|C|1049
8FC4|1|2A|A|1050
8FC4|1|2A|G|1051
8FC4|1|2A|C|1052
8FC4|1|2A|C|1053
*
8FC4|1|2A|G|1106
8FC4|1|2A|G|1107
8FC4|1|2A|U|1108
8FC4|1|2A|C|1109
8FC4|1|2A|G|1110
8FC4|1|2A|A|1111
8FC4|1|2A|G|1112

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2H

50S ribosomal protein L6