IL_8FIZ_053
3D structure
- PDB id
- 8FIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CAGC*GG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FIZ_053 not in the Motif Atlas
- Geometric match to IL_5W1H_001
- Geometric discrepancy: 0.2218
- The information below is about IL_5W1H_001
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_71421.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 27
Unit IDs
8FIZ|1|AA|C|1129
8FIZ|1|AA|A|1130
8FIZ|1|AA|G|1131
8FIZ|1|AA|C|1132
*
8FIZ|1|AA|G|1142
8FIZ|1|AA|G|1143
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AK
- 30S ribosomal protein S9
Coloring options: