IL_8FIZ_085
3D structure
- PDB id
- 8FIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UU*GGA
- Length
- 5 nucleotides
- Bulged bases
- 8FIZ|1|BA|G|729
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FIZ_085 not in the Motif Atlas
- Geometric match to IL_7A0S_017
- Geometric discrepancy: 0.0846
- The information below is about IL_7A0S_017
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.14
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 50
Unit IDs
8FIZ|1|BA|U|702
8FIZ|1|BA|U|703
*
8FIZ|1|BA|G|728
8FIZ|1|BA|G|729
8FIZ|1|BA|A|730
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain BD
- 50S ribosomal protein L2
Coloring options: