IL_8FIZ_108

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCCAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

8FIZ|1|BA|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FIZ|1|BA|C|1043
8FIZ|1|BA|C|1044
8FIZ|1|BA|C|1045
8FIZ|1|BA|A|1046
8FIZ|1|BA|G|1047
8FIZ|1|BA|A|1048
8FIZ|1|BA|C|1049
8FIZ|1|BA|A|1050
8FIZ|1|BA|G|1051
8FIZ|1|BA|C|1052
*
8FIZ|1|BA|G|1107
8FIZ|1|BA|U|1108
8FIZ|1|BA|C|1109
8FIZ|1|BA|G|1110
8FIZ|1|BA|A|1111
8FIZ|1|BA|G|1112

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BJ

50S ribosomal protein L6

Chain DG

50S ribosomal protein L10