IL_8FIZ_117

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UG*CAUCAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FIZ_117 not in the Motif Atlas

Homologous match to IL_5J7L_294

Geometric discrepancy: 0.3485

The information below is about IL_5J7L_294

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87211.1

Basepair signature

cWW-cSW-L-cWW-L

Number of instances in this motif group

1

Unit IDs

8FIZ|1|BA|U|1415
8FIZ|1|BA|G|1416
*
8FIZ|1|BA|C|1582
8FIZ|1|BA|A|1583
8FIZ|1|BA|U|1584
8FIZ|1|BA|C|1585
8FIZ|1|BA|A|1586
8FIZ|1|BA|G|1587

Current chains

Chain BA

23S rRNA

Nearby chains