IL_8FIZ_153

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGAG*CGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FIZ_153 not in the Motif Atlas

Homologous match to IL_7RQB_089

Geometric discrepancy: 0.0962

The information below is about IL_7RQB_089

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.10

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

33

Unit IDs

8FIZ|1|BA|C|2350
8FIZ|1|BA|G|2351
8FIZ|1|BA|A|2352
8FIZ|1|BA|G|2353
*
8FIZ|1|BA|C|2364
8FIZ|1|BA|G|2365
8FIZ|1|BA|A|2366
8FIZ|1|BA|G|2367

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BO

50S ribosomal protein L35

Chain DD

50S ribosomal protein L27