IL_8FIZ_168
3D structure
- PDB id
- 8FIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UU*ACUG
- Length
- 6 nucleotides
- Bulged bases
- 8FIZ|1|BA|C|2712, 8FIZ|1|BA|U|2713
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FIZ_168 not in the Motif Atlas
- Homologous match to IL_4WF9_103
- Geometric discrepancy: 0.0903
- The information below is about IL_4WF9_103
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_42626.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 14
Unit IDs
8FIZ|1|BA|U|2695
8FIZ|1|BA|U|2696
*
8FIZ|1|BA|A|2711
8FIZ|1|BA|C|2712
8FIZ|1|BA|U|2713
8FIZ|1|BA|G|2714
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain BV
- 50S ribosomal protein L17
- Chain BW
- 50S ribosomal protein L19
Coloring options: