IL_8FIZ_183

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGGAGCAAAC*GGUAGUC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FIZ|1|AA|G|774
8FIZ|1|AA|G|775
8FIZ|1|AA|G|776
8FIZ|1|AA|A|777
8FIZ|1|AA|G|778
8FIZ|1|AA|C|779
8FIZ|1|AA|A|780
8FIZ|1|AA|A|781
8FIZ|1|AA|A|782
8FIZ|1|AA|C|783
*
8FIZ|1|AA|G|799
8FIZ|1|AA|G|800
8FIZ|1|AA|U|801
8FIZ|1|AA|A|802
8FIZ|1|AA|G|803
8FIZ|1|AA|U|804
8FIZ|1|AA|C|805

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AM

30S ribosomal protein S11

Chain AU

30S ribosomal protein S21

Chain BA

Large subunit ribosomal RNA; LSU rRNA

Chain BD

50S ribosomal protein L2