IL_8FIZ_186

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CAUACAAAG*CAUAAAGUG

Length

18 nucleotides

Bulged bases

8FIZ|1|AA|U|1247, 8FIZ|1|AA|U|1286, 8FIZ|1|AA|A|1288, 8FIZ|1|AA|A|1289

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FIZ|1|AA|C|1245
8FIZ|1|AA|A|1246
8FIZ|1|AA|U|1247
8FIZ|1|AA|A|1248
8FIZ|1|AA|C|1249
8FIZ|1|AA|A|1250
8FIZ|1|AA|A|1251
8FIZ|1|AA|A|1252
8FIZ|1|AA|G|1253
*
8FIZ|1|AA|C|1284
8FIZ|1|AA|A|1285
8FIZ|1|AA|U|1286
8FIZ|1|AA|A|1287
8FIZ|1|AA|A|1288
8FIZ|1|AA|A|1289
8FIZ|1|AA|G|1290
8FIZ|1|AA|U|1291
8FIZ|1|AA|G|1292

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AF

30S ribosomal protein S14

Chain AH

30S ribosomal protein S10

Chain AK

30S ribosomal protein S9

Chain AL

30S ribosomal protein S7