IL_8FIZ_190

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAUGUUG*CAUCAUUUAAAGAAAGCGUAAUAGCUCAC

Length

37 nucleotides

Bulged bases

8FIZ|1|BA|U|1058, 8FIZ|1|BA|U|1061, 8FIZ|1|BA|C|1079, 8FIZ|1|BA|U|1082, 8FIZ|1|BA|U|1094, 8FIZ|1|BA|G|1099

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FIZ|1|BA|G|1055
8FIZ|1|BA|G|1056
8FIZ|1|BA|A|1057
8FIZ|1|BA|U|1058
8FIZ|1|BA|G|1059
8FIZ|1|BA|U|1060
8FIZ|1|BA|U|1061
8FIZ|1|BA|G|1062
*
8FIZ|1|BA|C|1076
8FIZ|1|BA|A|1077
8FIZ|1|BA|U|1078
8FIZ|1|BA|C|1079
8FIZ|1|BA|A|1080
8FIZ|1|BA|U|1081
8FIZ|1|BA|U|1082
8FIZ|1|BA|U|1083
8FIZ|1|BA|A|1084
8FIZ|1|BA|A|1085
8FIZ|1|BA|A|1086
8FIZ|1|BA|G|1087
8FIZ|1|BA|A|1088
8FIZ|1|BA|A|1089
8FIZ|1|BA|A|1090
8FIZ|1|BA|G|1091
8FIZ|1|BA|C|1092
8FIZ|1|BA|G|1093
8FIZ|1|BA|U|1094
8FIZ|1|BA|A|1095
8FIZ|1|BA|A|1096
8FIZ|1|BA|U|1097
8FIZ|1|BA|A|1098
8FIZ|1|BA|G|1099
8FIZ|1|BA|C|1100
8FIZ|1|BA|U|1101
8FIZ|1|BA|C|1102
8FIZ|1|BA|A|1103
8FIZ|1|BA|C|1104

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BL

50S ribosomal protein L11

Chain BP

50S ribosomal protein L36

Chain DG

50S ribosomal protein L10