IL_8FIZ_194

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AAC*GUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FIZ_194 not in the Motif Atlas

Geometric match to IL_4KQ0_004

Geometric discrepancy: 0.1421

The information below is about IL_4KQ0_004

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10167.6

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

51

Unit IDs

8FIZ|1|BA|A|2094
8FIZ|1|BA|A|2095
8FIZ|1|BA|C|2096
*
8FIZ|1|BA|G|2193
8FIZ|1|BA|U|2194
8FIZ|1|BA|U|2195

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BK

50S ribosomal protein L9