IL_8FIZ_196

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUGUAGGAUAGGUGGGAG*CGACCUUGAAAUACCACCC

Length

37 nucleotides

Bulged bases

8FIZ|1|BA|U|2111, 8FIZ|1|BA|G|2112, 8FIZ|1|BA|U|2113, 8FIZ|1|BA|A|2114, 8FIZ|1|BA|G|2115, 8FIZ|1|BA|U|2118, 8FIZ|1|BA|G|2120, 8FIZ|1|BA|U|2122, 8FIZ|1|BA|G|2124, 8FIZ|1|BA|A|2163, 8FIZ|1|BA|U|2172, 8FIZ|1|BA|C|2175, 8FIZ|1|BA|A|2176, 8FIZ|1|BA|C|2177

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FIZ|1|BA|G|2110
8FIZ|1|BA|U|2111
8FIZ|1|BA|G|2112
8FIZ|1|BA|U|2113
8FIZ|1|BA|A|2114
8FIZ|1|BA|G|2115
8FIZ|1|BA|G|2116
8FIZ|1|BA|A|2117
8FIZ|1|BA|U|2118
8FIZ|1|BA|A|2119
8FIZ|1|BA|G|2120
8FIZ|1|BA|G|2121
8FIZ|1|BA|U|2122
8FIZ|1|BA|G|2123
8FIZ|1|BA|G|2124
8FIZ|1|BA|G|2125
8FIZ|1|BA|A|2126
8FIZ|1|BA|G|2127
*
8FIZ|1|BA|C|2161
8FIZ|1|BA|G|2162
8FIZ|1|BA|A|2163
8FIZ|1|BA|C|2164
8FIZ|1|BA|C|2165
8FIZ|1|BA|U|2166
8FIZ|1|BA|U|2167
8FIZ|1|BA|G|2168
8FIZ|1|BA|A|2169
8FIZ|1|BA|A|2170
8FIZ|1|BA|A|2171
8FIZ|1|BA|U|2172
8FIZ|1|BA|A|2173
8FIZ|1|BA|C|2174
8FIZ|1|BA|C|2175
8FIZ|1|BA|A|2176
8FIZ|1|BA|C|2177
8FIZ|1|BA|C|2178
8FIZ|1|BA|C|2179

Current chains

Chain BA

23S rRNA

Nearby chains