IL_8FKP_056

3D structure

PDB id

8FKP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

AACAAUG*CUAU

Length

11 nucleotides

Bulged bases

8FKP|1|L3|A|2836

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKP|1|L3|A|2832
8FKP|1|L3|A|2833
8FKP|1|L3|C|2834
8FKP|1|L3|A|2835
8FKP|1|L3|A|2836
8FKP|1|L3|U|2837
8FKP|1|L3|G|2838
*
8FKP|1|L3|C|3850
8FKP|1|L3|U|3851
8FKP|1|L3|A|3852
8FKP|1|L3|U|3853

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LN

60S ribosomal protein L3

Chain NE

Surfeit locus protein 6

Chain NN

Suppressor of SWI4 1 homolog