IL_8FKQ_040

3D structure

PDB id

8FKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State A2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

GAAAG*CUAGUAGC

Length

13 nucleotides

Bulged bases

8FKQ|1|L3|A|1650, 8FKQ|1|L3|G|1654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKQ|1|L3|G|1522
8FKQ|1|L3|A|1523
8FKQ|1|L3|A|1524
8FKQ|1|L3|A|1525
8FKQ|1|L3|G|1526
*
8FKQ|1|L3|C|1648
8FKQ|1|L3|U|1649
8FKQ|1|L3|A|1650
8FKQ|1|L3|G|1651
8FKQ|1|L3|U|1652
8FKQ|1|L3|A|1653
8FKQ|1|L3|G|1654
8FKQ|1|L3|C|1655

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L6

60S ribosomal protein L13

Chain NE

Surfeit locus protein 6

Chain SA

60S ribosomal protein L4