IL_8FKR_026

3D structure

PDB id

8FKR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State B1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

8FKR|1|L3|C|469

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKR|1|L3|A|466
8FKR|1|L3|U|467
8FKR|1|L3|U|468
8FKR|1|L3|C|469
8FKR|1|L3|A|470
8FKR|1|L3|A|471
8FKR|1|L3|C|472
*
8FKR|1|L3|G|682
8FKR|1|L3|C|683
8FKR|1|L3|G|684
8FKR|1|L3|C|685
8FKR|1|L3|A|686
8FKR|1|L3|U|687
8FKR|1|L3|U|688
8FKR|1|L3|U|689

Current chains

Chain L3

28S rRNA

Nearby chains

Chain NM

Protein MAK16 homolog

Chain NQ

WD repeat-containing protein 74