IL_8FKR_030

3D structure

PDB id

8FKR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State B1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

AAGG*CAGCAGCACU

Length

14 nucleotides

Bulged bases

8FKR|1|L3|A|932, 8FKR|1|L3|C|934, 8FKR|1|L3|A|935, 8FKR|1|L3|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKR|1|L3|A|732
8FKR|1|L3|A|733
8FKR|1|L3|G|734
8FKR|1|L3|G|735
*
8FKR|1|L3|C|928
8FKR|1|L3|A|929
8FKR|1|L3|G|930
8FKR|1|L3|C|931
8FKR|1|L3|A|932
8FKR|1|L3|G|933
8FKR|1|L3|C|934
8FKR|1|L3|A|935
8FKR|1|L3|C|936
8FKR|1|L3|U|937

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L8

60S ribosomal protein L14

Chain LC

60S ribosomal protein L18a

Chain SA

60S ribosomal protein L4