IL_8FKR_087

3D structure

PDB id

8FKR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State B1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

8FKR|1|L3|G|5041

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKR|1|L3|U|5003
8FKR|1|L3|C|5004
8FKR|1|L3|G|5005
8FKR|1|L3|U|5006
8FKR|1|L3|A|5007
8FKR|1|L3|C|5008
8FKR|1|L3|G|5009
*
8FKR|1|L3|U|5039
8FKR|1|L3|U|5040
8FKR|1|L3|G|5041
8FKR|1|L3|A|5042
8FKR|1|L3|A|5043
8FKR|1|L3|A|5044

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LN

60S ribosomal protein L3

Chain NG

RRP15-like protein

Chain NN

Suppressor of SWI4 1 homolog

Chain SV

Probable ribosome biogenesis protein RLP24