IL_8FKS_030

3D structure

PDB id

8FKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State B2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

AAGG*CAGCAGCACU

Length

14 nucleotides

Bulged bases

8FKS|1|L3|A|932, 8FKS|1|L3|C|934, 8FKS|1|L3|A|935, 8FKS|1|L3|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKS|1|L3|A|732
8FKS|1|L3|A|733
8FKS|1|L3|G|734
8FKS|1|L3|G|735
*
8FKS|1|L3|C|928
8FKS|1|L3|A|929
8FKS|1|L3|G|930
8FKS|1|L3|C|931
8FKS|1|L3|A|932
8FKS|1|L3|G|933
8FKS|1|L3|C|934
8FKS|1|L3|A|935
8FKS|1|L3|C|936
8FKS|1|L3|U|937

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L8

60S ribosomal protein L14

Chain LC

60S ribosomal protein L18a

Chain SA

60S ribosomal protein L4