IL_8FKS_053

3D structure

PDB id

8FKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State B2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

AGAAAA*UGAAAAU

Length

13 nucleotides

Bulged bases

8FKS|1|L3|A|1943

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKS|1|L3|A|1939
8FKS|1|L3|G|1940
8FKS|1|L3|A|1941
8FKS|1|L3|A|1942
8FKS|1|L3|A|1943
8FKS|1|L3|A|1944
*
8FKS|1|L3|U|2038
8FKS|1|L3|G|2039
8FKS|1|L3|A|2040
8FKS|1|L3|A|2041
8FKS|1|L3|A|2042
8FKS|1|L3|A|2043
8FKS|1|L3|U|2044

Current chains

Chain L3

28S rRNA

Nearby chains

Chain NF

Ribosome biogenesis protein NSA2 homolog

Chain SR

GTP-binding protein 4