IL_8FKS_091

3D structure

PDB id

8FKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State B2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

8FKS|1|L3|G|5041

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKS|1|L3|U|5003
8FKS|1|L3|C|5004
8FKS|1|L3|G|5005
8FKS|1|L3|U|5006
8FKS|1|L3|A|5007
8FKS|1|L3|C|5008
8FKS|1|L3|G|5009
*
8FKS|1|L3|U|5039
8FKS|1|L3|U|5040
8FKS|1|L3|G|5041
8FKS|1|L3|A|5042
8FKS|1|L3|A|5043
8FKS|1|L3|A|5044

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LN

60S ribosomal protein L3

Chain NG

RRP15-like protein

Chain NN

Suppressor of SWI4 1 homolog

Chain SV

Probable ribosome biogenesis protein RLP24