IL_8FKU_065

3D structure

PDB id

8FKU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

AGAUG*CAGUGAAU

Length

13 nucleotides

Bulged bases

8FKU|1|L3|U|2554, 8FKU|1|L3|G|2574, 8FKU|1|L3|G|2576

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKU|1|L3|A|2551
8FKU|1|L3|G|2552
8FKU|1|L3|A|2553
8FKU|1|L3|U|2554
8FKU|1|L3|G|2555
*
8FKU|1|L3|C|2572
8FKU|1|L3|A|2573
8FKU|1|L3|G|2574
8FKU|1|L3|U|2575
8FKU|1|L3|G|2576
8FKU|1|L3|A|2765
8FKU|1|L3|A|2766
8FKU|1|L3|U|2767

Current chains

Chain L3

28S rRNA

Nearby chains

Chain SI

60S ribosomal protein L7-like 1

Chain SM

Pescadillo homolog

Chain SS

Ribosome biogenesis protein BOP1