IL_8FKU_076

3D structure

PDB id

8FKU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GGUGUAGAAUAA*UAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKU|1|L3|G|3955
8FKU|1|L3|G|3956
8FKU|1|L3|U|3957
8FKU|1|L3|G|3958
8FKU|1|L3|U|3959
8FKU|1|L3|A|3960
8FKU|1|L3|G|3961
8FKU|1|L3|A|3962
8FKU|1|L3|A|3963
8FKU|1|L3|U|3964
8FKU|1|L3|A|3965
8FKU|1|L3|A|3966
*
8FKU|1|L3|U|4055
8FKU|1|L3|A|4056
8FKU|1|L3|C|4057

Current chains

Chain L3

28S rRNA

Nearby chains

Chain BB

60S ribosomal protein L10a

Chain SY

Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase