IL_8FKV_014
3D structure
- PDB id
- 8FKV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nucleolar pre-60S ribosomal subunit (State D1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- CGAAU*ACAUGUG
- Length
- 12 nucleotides
- Bulged bases
- 8FKV|1|L3|G|119, 8FKV|1|L3|U|150
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FKV|1|L3|C|118
8FKV|1|L3|G|119
8FKV|1|L3|A|120
8FKV|1|L3|A|121
8FKV|1|L3|U|122
*
8FKV|1|L3|A|147
8FKV|1|L3|C|148
8FKV|1|L3|A|149
8FKV|1|L3|U|150
8FKV|1|L3|G|151
8FKV|1|L3|U|152
8FKV|1|L3|G|153
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain L1
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain L9
- 60S ribosomal protein L15
- Chain LS
- 60S ribosomal protein L35
- Chain SE
- 60S ribosomal protein L7a
- Chain SM
- Pescadillo homolog
- Chain SS
- Ribosome biogenesis protein BOP1
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