IL_8FKV_026

3D structure

PDB id

8FKV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State D1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

8FKV|1|L3|C|469, 8FKV|1|L3|A|686

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKV|1|L3|A|466
8FKV|1|L3|U|467
8FKV|1|L3|U|468
8FKV|1|L3|C|469
8FKV|1|L3|A|470
8FKV|1|L3|A|471
8FKV|1|L3|C|472
*
8FKV|1|L3|G|682
8FKV|1|L3|C|683
8FKV|1|L3|G|684
8FKV|1|L3|C|685
8FKV|1|L3|A|686
8FKV|1|L3|U|687
8FKV|1|L3|U|688
8FKV|1|L3|U|689

Current chains

Chain L3

28S rRNA

Nearby chains

Chain NM

Protein MAK16 homolog

Chain NQ

WD repeat-containing protein 74