IL_8FKV_050
3D structure
- PDB id
- 8FKV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nucleolar pre-60S ribosomal subunit (State D1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- GACCCCAGAAAA*UGAAAAUGGAUGGCGC
- Length
- 28 nucleotides
- Bulged bases
- 8FKV|1|L3|C|1935, 8FKV|1|L3|C|1938, 8FKV|1|L3|A|1943, 8FKV|1|L3|U|2044
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FKV|1|L3|G|1933
8FKV|1|L3|A|1934
8FKV|1|L3|C|1935
8FKV|1|L3|C|1936
8FKV|1|L3|C|1937
8FKV|1|L3|C|1938
8FKV|1|L3|A|1939
8FKV|1|L3|G|1940
8FKV|1|L3|A|1941
8FKV|1|L3|A|1942
8FKV|1|L3|A|1943
8FKV|1|L3|A|1944
*
8FKV|1|L3|U|2038
8FKV|1|L3|G|2039
8FKV|1|L3|A|2040
8FKV|1|L3|A|2041
8FKV|1|L3|A|2042
8FKV|1|L3|A|2043
8FKV|1|L3|U|2044
8FKV|1|L3|G|2045
8FKV|1|L3|G|2046
8FKV|1|L3|A|2047
8FKV|1|L3|U|2048
8FKV|1|L3|G|2049
8FKV|1|L3|G|2050
8FKV|1|L3|C|2051
8FKV|1|L3|G|2052
8FKV|1|L3|C|2053
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain L7
- 60S ribosomal protein L13a
- Chain LC
- 60S ribosomal protein L18a
- Chain LT
- 60S ribosomal protein L35a
- Chain NB
- Guanine nucleotide-binding protein-like 3
- Chain NF
- Ribosome biogenesis protein NSA2 homolog
- Chain SR
- GTP-binding protein 4
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