IL_8FKV_081

3D structure

PDB id

8FKV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State D1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

UUG*CCAAG

Length

8 nucleotides

Bulged bases

8FKV|1|L3|A|4488

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKV|1|L3|U|4468
8FKV|1|L3|U|4469
8FKV|1|L3|G|4470
*
8FKV|1|L3|C|4485
8FKV|1|L3|C|4486
8FKV|1|L3|A|4487
8FKV|1|L3|A|4488
8FKV|1|L3|G|4489

Current chains

Chain L3

28S rRNA

Nearby chains

Chain NB

Guanine nucleotide-binding protein-like 3

Chain NF

Ribosome biogenesis protein NSA2 homolog

Chain NK

Protein LLP homolog

Chain SG

60S ribosomal protein L9

Chain SR

GTP-binding protein 4