IL_8FKW_042

3D structure

PDB id

8FKW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State D2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GAAAG*CUAGUAGC

Length

13 nucleotides

Bulged bases

8FKW|1|L3|A|1650, 8FKW|1|L3|G|1654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKW|1|L3|G|1522
8FKW|1|L3|A|1523
8FKW|1|L3|A|1524
8FKW|1|L3|A|1525
8FKW|1|L3|G|1526
*
8FKW|1|L3|C|1648
8FKW|1|L3|U|1649
8FKW|1|L3|A|1650
8FKW|1|L3|G|1651
8FKW|1|L3|U|1652
8FKW|1|L3|A|1653
8FKW|1|L3|G|1654
8FKW|1|L3|C|1655

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L6

60S ribosomal protein L13

Chain LW

60S ribosomal protein L37

Chain SA

60S ribosomal protein L4