IL_8FKW_070

3D structure

PDB id

8FKW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State D2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GAAGAC*GAUAAC

Length

12 nucleotides

Bulged bases

8FKW|1|L3|G|3907

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKW|1|L3|G|3904
8FKW|1|L3|A|3905
8FKW|1|L3|A|3906
8FKW|1|L3|G|3907
8FKW|1|L3|A|3908
8FKW|1|L3|C|3909
*
8FKW|1|L3|G|4393
8FKW|1|L3|A|4394
8FKW|1|L3|U|4395
8FKW|1|L3|A|4396
8FKW|1|L3|A|4397
8FKW|1|L3|C|4398

Current chains

Chain L3

28S rRNA

Nearby chains

Chain NF

Ribosome biogenesis protein NSA2 homolog

Chain SN

Probable rRNA-processing protein EBP2

Chain SR

GTP-binding protein 4