IL_8FKW_074

3D structure

PDB id

8FKW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State D2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CGGUG*CCAG

Length

9 nucleotides

Bulged bases

8FKW|1|L3|G|3938

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKW|1|L3|C|3937
8FKW|1|L3|G|3938
8FKW|1|L3|G|3939
8FKW|1|L3|U|3940
8FKW|1|L3|G|3941
*
8FKW|1|L3|C|4072
8FKW|1|L3|C|4171
8FKW|1|L3|A|4172
8FKW|1|L3|G|4173

Current chains

Chain L3

28S rRNA

Nearby chains

Chain SY

Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase