IL_8FKW_077

3D structure

PDB id

8FKW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State D2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GGUGUAGAAUAA*UAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKW|1|L3|G|3955
8FKW|1|L3|G|3956
8FKW|1|L3|U|3957
8FKW|1|L3|G|3958
8FKW|1|L3|U|3959
8FKW|1|L3|A|3960
8FKW|1|L3|G|3961
8FKW|1|L3|A|3962
8FKW|1|L3|A|3963
8FKW|1|L3|U|3964
8FKW|1|L3|A|3965
8FKW|1|L3|A|3966
*
8FKW|1|L3|U|4055
8FKW|1|L3|A|4056
8FKW|1|L3|C|4057

Current chains

Chain L3

28S rRNA

Nearby chains

Chain BB

60S ribosomal protein L10a

Chain SY

Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase