IL_8FKX_074

3D structure

PDB id

8FKX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State E)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

CGGUG*CCAG

Length

9 nucleotides

Bulged bases

8FKX|1|L3|G|3938

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKX|1|L3|C|3937
8FKX|1|L3|G|3938
8FKX|1|L3|G|3939
8FKX|1|L3|U|3940
8FKX|1|L3|G|3941
*
8FKX|1|L3|C|4072
8FKX|1|L3|C|4171
8FKX|1|L3|A|4172
8FKX|1|L3|G|4173

Current chains

Chain L3

28S rRNA

Nearby chains

Chain NA

Nucleolar complex protein 2 homolog

Chain SY

Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase