IL_8FKY_086

3D structure

PDB id

8FKY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State F)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.67 Å

Loop

Sequence

CGGUG*CCAG

Length

9 nucleotides

Bulged bases

8FKY|1|L3|G|3938

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKY|1|L3|C|3937
8FKY|1|L3|G|3938
8FKY|1|L3|G|3939
8FKY|1|L3|U|3940
8FKY|1|L3|G|3941
*
8FKY|1|L3|C|4072
8FKY|1|L3|C|4171
8FKY|1|L3|A|4172
8FKY|1|L3|G|4173

Current chains

Chain L3

28S rRNA

Nearby chains

Chain NA

Nucleolar complex protein 2 homolog

Chain SY

Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase