IL_8FKY_089

3D structure

PDB id

8FKY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State F)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.67 Å

Loop

Sequence

GGUGUAGAAUAA*UAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKY|1|L3|G|3955
8FKY|1|L3|G|3956
8FKY|1|L3|U|3957
8FKY|1|L3|G|3958
8FKY|1|L3|U|3959
8FKY|1|L3|A|3960
8FKY|1|L3|G|3961
8FKY|1|L3|A|3962
8FKY|1|L3|A|3963
8FKY|1|L3|U|3964
8FKY|1|L3|A|3965
8FKY|1|L3|A|3966
*
8FKY|1|L3|U|4055
8FKY|1|L3|A|4056
8FKY|1|L3|C|4057

Current chains

Chain L3

28S rRNA

Nearby chains

Chain BB

60S ribosomal protein L10a

Chain SY

Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase