3D structure

PDB id
8FKY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human nucleolar pre-60S ribosomal subunit (State F)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.67 Å

Loop

Sequence
UGG*CGAAG
Length
8 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8FKY|1|L3|U|4632
8FKY|1|L3|G|4633
8FKY|1|L3|G|4637
*
8FKY|1|L3|C|4662
8FKY|1|L3|G|4663
8FKY|1|L3|A|4664
8FKY|1|L3|A|4665
8FKY|1|L3|G|4666

Current chains

Chain L3
28S rRNA

Nearby chains

Chain LN
60S ribosomal protein L3
Chain SV
Probable ribosome biogenesis protein RLP24

Coloring options:

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