IL_8FKZ_018

3D structure

PDB id

8FKZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State G)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

GCUCC*GCCC

Length

9 nucleotides

Bulged bases

8FKZ|1|L3|U|171

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKZ|1|L3|G|169
8FKZ|1|L3|C|170
8FKZ|1|L3|U|171
8FKZ|1|L3|C|172
8FKZ|1|L3|C|173
*
8FKZ|1|L3|G|263
8FKZ|1|L3|C|264
8FKZ|1|L3|C|265
8FKZ|1|L3|C|266

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L6

60S ribosomal protein L13

Chain LS

60S ribosomal protein L35

Chain NL

Ribosome biogenesis protein NOP53