IL_8FL2_118

3D structure

PDB id

8FL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State I1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.67 Å

Loop

Sequence

G(PSU)CA(A2M)AGU*AA(PSU)GAAGC

Length

16 nucleotides

Bulged bases

8FL2|1|L3|G|3735

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL2|1|L3|G|3714
8FL2|1|L3|PSU|3715
8FL2|1|L3|C|3716
8FL2|1|L3|A|3717
8FL2|1|L3|A2M|3718
8FL2|1|L3|A|3719
8FL2|1|L3|G|3720
8FL2|1|L3|U|3721
*
8FL2|1|L3|A|3732
8FL2|1|L3|A|3733
8FL2|1|L3|PSU|3734
8FL2|1|L3|G|3735
8FL2|1|L3|A|3736
8FL2|1|L3|A|3737
8FL2|1|L3|G|3738
8FL2|1|L3|C|3739

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LU

60S ribosomal protein L36

Chain NL

Ribosome biogenesis protein NOP53

Chain NT

Protein SDA1 homolog