IL_8FL2_188

3D structure

PDB id

8FL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State I1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.67 Å

Loop

Sequence

CGGGG*CGCCGUG

Length

12 nucleotides

Bulged bases

8FL2|1|L3|G|1359, 8FL2|1|L3|C|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL2|1|L3|C|1357
8FL2|1|L3|G|1358
8FL2|1|L3|G|1359
8FL2|1|L3|G|1360
8FL2|1|L3|G|1361
*
8FL2|1|L3|C|1376
8FL2|1|L3|G|1377
8FL2|1|L3|C|1378
8FL2|1|L3|C|1379
8FL2|1|L3|G|1380
8FL2|1|L3|U|1381
8FL2|1|L3|G|1382

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L6

60S ribosomal protein L13

Chain L9

60S ribosomal protein L15

Chain LK

60S ribosomal protein L27a

Chain SA

60S ribosomal protein L4