3D structure

PDB id
8FL2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human nuclear pre-60S ribosomal subunit (State I1)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.67 Å

Loop

Sequence
AUUAGA*(PSU)A(PSU)(PSU)
Length
10 nucleotides
Bulged bases
None detected
QA status
Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8FL2|1|L3|A|1746
8FL2|1|L3|U|1747
8FL2|1|L3|U|1748
8FL2|1|L3|A|1749
8FL2|1|L3|G|1750
8FL2|1|L3|A|1751
*
8FL2|1|L3|PSU|1779
8FL2|1|L3|A|1780
8FL2|1|L3|PSU|1781
8FL2|1|L3|PSU|1782

Current chains

Chain L3
28S rRNA

Nearby chains

Chain L5
60S ribosomal protein L11
Chain NC
Nucleolar GTP-binding protein 2
Chain NF
Ribosome biogenesis protein NSA2 homolog
Chain NJ
Notchless protein homolog 1
Chain NT
Protein SDA1 homolog
Chain NU
Testis-expressed protein 10
Chain NZ
Coiled-coil domain-containing protein 86

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.2948 s