IL_8FL4_085

3D structure

PDB id

8FL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State I3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

GAGUGGC*GCGC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL4|1|L3|G|2542
8FL4|1|L3|A|2543
8FL4|1|L3|G|2544
8FL4|1|L3|U|2545
8FL4|1|L3|G|2546
8FL4|1|L3|G|2547
8FL4|1|L3|C|2548
*
8FL4|1|L3|G|2771
8FL4|1|L3|C|2772
8FL4|1|L3|G|2773
8FL4|1|L3|C|2774

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L1

5.8S ribosomal RNA; 5.8S rRNA

Chain LR

60S ribosomal protein L34

Chain LY

60S ribosomal protein L38

Chain NL

Ribosome biogenesis protein NOP53

Chain SM

Pescadillo homolog