IL_8FL4_129

3D structure

PDB id

8FL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State I3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

GGUG(PSU)AGAAUAA*UAC

Length

15 nucleotides

Bulged bases

8FL4|1|L3|G|3958

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL4|1|L3|G|3955
8FL4|1|L3|G|3956
8FL4|1|L3|U|3957
8FL4|1|L3|G|3958
8FL4|1|L3|PSU|3959
8FL4|1|L3|A|3960
8FL4|1|L3|G|3961
8FL4|1|L3|A|3962
8FL4|1|L3|A|3963
8FL4|1|L3|U|3964
8FL4|1|L3|A|3965
8FL4|1|L3|A|3966
*
8FL4|1|L3|U|4055
8FL4|1|L3|A|4056
8FL4|1|L3|C|4057

Current chains

Chain L3

28S rRNA

Nearby chains

Chain BB

60S ribosomal protein L10a

Chain NT

Protein SDA1 homolog

Chain NX

Proline-, glutamic acid- and leucine-rich protein 1

Chain NY

Proline-, glutamic acid- and leucine-rich protein 1