IL_8FLA_032

3D structure

PDB id

8FLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

GCCCG*CC

Length

7 nucleotides

Bulged bases

8FLA|1|L3|C|501, 8FLA|1|L3|C|502, 8FLA|1|L3|C|503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FLA_032 not in the Motif Atlas

Geometric match to IL_7V9E_001

Geometric discrepancy: 0.2054

The information below is about IL_7V9E_001

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.2

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

8FLA|1|L3|G|500
8FLA|1|L3|C|501
8FLA|1|L3|C|502
8FLA|1|L3|C|503
8FLA|1|L3|G|504
*
8FLA|1|L3|C|654
8FLA|1|L3|C|655

Current chains

Chain L3

28S rRNA

Nearby chains

Chain SA

60S ribosomal protein L4