3D structure

PDB id
8FLA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human nuclear pre-60S ribosomal subunit (State K1)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.63 Å

Loop

Sequence
CGGGG*CGCCGUG
Length
12 nucleotides
Bulged bases
8FLA|1|L3|G|1359, 8FLA|1|L3|C|1378
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8FLA|1|L3|C|1357
8FLA|1|L3|G|1358
8FLA|1|L3|G|1359
8FLA|1|L3|G|1360
8FLA|1|L3|G|1361
*
8FLA|1|L3|C|1376
8FLA|1|L3|G|1377
8FLA|1|L3|C|1378
8FLA|1|L3|C|1379
8FLA|1|L3|G|1380
8FLA|1|L3|U|1381
8FLA|1|L3|G|1382

Current chains

Chain L3
28S rRNA

Nearby chains

Chain L6
60S ribosomal protein L13
Chain L9
60S ribosomal protein L15
Chain LK
60S ribosomal protein L27a
Chain SA
60S ribosomal protein L4

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1646 s