3D structure

PDB id
8FLA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human nuclear pre-60S ribosomal subunit (State K1)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.63 Å

Loop

Sequence
CAUUG*CCAAGCG
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8FLA|1|L3|C|4466
8FLA|1|L3|A|4467
8FLA|1|L3|U|4468
8FLA|1|L3|U|4469
8FLA|1|L3|G|4470
*
8FLA|1|L3|C|4485
8FLA|1|L3|C|4486
8FLA|1|L3|A|4487
8FLA|1|L3|A|4488
8FLA|1|L3|G|4489
8FLA|1|L3|C|4490
8FLA|1|L3|G|4491

Current chains

Chain L3
28S rRNA

Nearby chains

Chain L7
60S ribosomal protein L13a
Chain LG
60S ribosomal protein L23
Chain LN
60S ribosomal protein L3
Chain NK
Protein LLP homolog
Chain SG
60S ribosomal protein L9
Chain SR
GTP-binding protein 4
Chain VB
Leydig cell tumor 10 kDa protein homolog

Coloring options:

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