3D structure

PDB id
8FLC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human nuclear pre-60S ribosomal subunit (State K3)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.76 Å

Loop

Sequence
CGGUAAA*U(PSU)AAAUG
Length
14 nucleotides
Bulged bases
None detected
QA status
Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8FLC|1|L3|C|1732
8FLC|1|L3|G|1733
8FLC|1|L3|G|1734
8FLC|1|L3|U|1735
8FLC|1|L3|A|1736
8FLC|1|L3|A|1737
8FLC|1|L3|A|1738
*
8FLC|1|L3|U|1791
8FLC|1|L3|PSU|1792
8FLC|1|L3|A|1793
8FLC|1|L3|A|1794
8FLC|1|L3|A|1795
8FLC|1|L3|U|1796
8FLC|1|L3|G|1797

Current chains

Chain L3
28S rRNA

Nearby chains

Chain L4
5S ribosomal RNA; 5S rRNA
Chain LE
60S ribosomal protein L21
Chain NR
Translation machinery-associated protein 16
Chain SB
60S ribosomal protein L5
Chain SD
60S ribosomal protein L7

Coloring options:

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