IL_8FLC_074

3D structure

PDB id

8FLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

GUGGC*GAAUC

Length

10 nucleotides

Bulged bases

8FLC|1|L3|G|1975

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FLC_074 not in the Motif Atlas

Homologous match to IL_8C3A_058

Geometric discrepancy: 0.3821

The information below is about IL_8C3A_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_30542.5

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

8FLC|1|L3|G|1973
8FLC|1|L3|U|1974
8FLC|1|L3|G|1975
8FLC|1|L3|G|1976
8FLC|1|L3|C|1977
*
8FLC|1|L3|G|1989
8FLC|1|L3|A|1990
8FLC|1|L3|A|1991
8FLC|1|L3|U|1992
8FLC|1|L3|C|1993

Current chains

Chain L3

28S rRNA

Nearby chains

Chain BA

60S ribosomal protein L12