IL_8FLC_134
3D structure
- PDB id
- 8FLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State K3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- G(PSU)G*CAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FLC_134 not in the Motif Atlas
- Geometric match to IL_5VCI_005
- Geometric discrepancy: 0.2315
- The information below is about IL_5VCI_005
- Detailed Annotation
- Not an internal loop
- Broad Annotation
- Not an internal loop
- Motif group
- IL_64417.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 18
Unit IDs
8FLC|1|L3|G|4470
8FLC|1|L3|PSU|4471
8FLC|1|L3|G|4472
*
8FLC|1|L3|C|4483
8FLC|1|L3|A|4484
8FLC|1|L3|C|4485
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain NK
- Protein LLP homolog
- Chain SG
- 60S ribosomal protein L9
- Chain SR
- GTP-binding protein 4
- Chain VB
- Leydig cell tumor 10 kDa protein homolog
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