IL_8FLD_067

3D structure

PDB id

8FLD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State L1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

GCGAA(PSU)G*CAAAC

Length

12 nucleotides

Bulged bases

8FLD|1|L3|G|1741, 8FLD|1|L3|A|1742

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLD|1|L3|G|1739
8FLD|1|L3|C|1740
8FLD|1|L3|G|1741
8FLD|1|L3|A|1742
8FLD|1|L3|A|1743
8FLD|1|L3|PSU|1744
8FLD|1|L3|G|1745
*
8FLD|1|L3|C|1785
8FLD|1|L3|A|1786
8FLD|1|L3|A|1787
8FLD|1|L3|A|1788
8FLD|1|L3|C|1789

Current chains

Chain L3

28S rRNA

Nearby chains

Chain BE

60S ribosomal protein L10

Chain L4

5S ribosomal RNA; 5S rRNA

Chain LE

60S ribosomal protein L21

Chain SB

60S ribosomal protein L5